Create the 'seuratextend' Conda Environment

Initializes a Conda environment named 'seuratextend' which includes all necessary Python packages for running `scVelo`, `Palantir`, and `CellRank` via `SeuratExtend`. This function is ideal for users setting up their analytical environment for the first time or those who need to ensure they have a compatible environment setup.

create_condaenv_seuratextend()

Value

Does not return any value; it creates and configures a new Conda environment.

Details

When you run functions from `SeuratExtend` that require Python integrations, such as `scVelo`, `Palantir`, or `CellRank`, you might need a specific set of Python packages installed. This function facilitates the setup of a Conda environment specifically tailored for these tools, managed through `reticulate`. The environment setup is automatic and checks your operating system to configure appropriately. It is supported on Windows, macOS, and Linux (Ubuntu 20.04), ensuring broad compatibility and ease of setup.

Examples

if (FALSE) {
# To manually create the 'seuratextend' Conda environment, execute:
create_condaenv_seuratextend()
}