StackedViolin.Rd
Alias of VlnPlot2()
StackedViolin(
matr,
f,
f2 = NULL,
features = NULL,
t = F,
cols = "pro_default",
ncol = NULL,
lab_fill = "group",
scales = "free_y",
violin = T,
box = T,
width = 0.9,
show.mean = FALSE,
mean_colors = c("red", "blue"),
pt = T,
hide.outlier = F,
pt.style = c("jitter", "quasirandom"),
pt.size = 0.2,
pt.alpha = 1,
strip.position = "top",
stat.method = c("none", "wilcox.test", "t.test"),
stats.method = NULL,
p.adjust.method = "holm",
label = c("p.signif", "p", "p.adj", "p.format"),
comparisons = NULL,
hide.ns = TRUE,
step.increase = 0.12,
tip.length = 0.03,
...
)
StackedViolin_v3(
seu,
features,
group.by = NULL,
split.by = NULL,
cells = NULL,
slot = "data",
assay = NULL,
priority = c("expr", "none"),
cols = "auto",
load.cols = TRUE,
ncol = NULL,
lab_fill = "group",
scales = "free_y",
violin = T,
box = T,
width = 0.9,
show.mean = FALSE,
mean_colors = c("red", "blue"),
pt = T,
hide.outlier = F,
pt.style = c("jitter", "quasirandom"),
pt.size = 0.2,
pt.alpha = 1,
strip.position = "top",
stat.method = c("none", "wilcox.test", "t.test"),
stats.method = NULL,
p.adjust.method = "holm",
label = c("p.signif", "p", "p.adj", "p.format"),
comparisons = NULL,
hide.ns = TRUE,
step.increase = 0.12,
tip.length = 0.03,
...
)